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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27802859
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLSCGLAEES CTPGFESNLL VFKVHKDHLH RGERLGRVRF NTCDRRTRVY FQSTDQEIDL  60
   61 NRDGTLMMRR SVTLHEGFKE FSVSAWDSSG KKHTTSVRVE RMESSSDDLV LTFPKSSTGL 120
  121 KRAKRGWIIP PVSVFENSKG PFPMRLVQIK SDSASEYQMA YKITGEGADQ DPKGIFKIDR 180
  181 LSGWINVTQQ LDREEKASYK LVAHATGVDV NIVEKPFEFI VTVTDQNDNK PVFNQNPFNG 240
  241 NVPEALEKGE VFMTVTATDA DDKENTDNAD ISYAIISQDP PSAKPIMFAI NPVSGGISVL 300
  301 ETGLDREQWS RYTLVITATD MNGEGGSTTG TAVITVMDSN DNAPLFEQTS HTVSVPENQV 360
  361 GAQVANLPVT DGDEPESTAW STKYRVIGGD KGGFFNVSTG PSRLEGVITT VKPLDCEKTK 420
  421 QYILSVIVVN DDKFVGSLPT STATVTVNVE DVNEPPEFIP KEKFISKPED LPVGSNLVIY 480
  481 TATDVDTEKK QKITYRIDYD PSGWLSITDS GQIQVKKSMD RESSNVKDGK YKALILALDD 540
  541 DVESPATGTG TLVIELQDVN DNAPVINERT IKLCNRESAP VLLSITDNDG PPFAGPFSVE 600
  601 PQGDTSKNWS VFFNETGHYL SLKSQSRLDQ GEYNVVLRVT DREGESQENT IQASVCDCKG 660
  661 EAFQCTENQE AGRPLFGVLG VLGGILLLLL LGLLILPEDD VRDNIYYYDE Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle