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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4572671, gi|2...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQEVLPKKS KTRLKIPRFG RFKVFPENFE IERDKILDPG GDAVLQWNRV FLFWCLVALY  60
   61 VDPLFFFLSS VKRIGRSSCM TTDLKLGIVI TFFRTLADLF YVLHIVIKFR TAYVSRTSRV 120
  121 FGRGELVKDP KLIARRYLRS DFIVDLIACL PLPQIVSWFI LPSIRSSHSD HTTNALVLIV 180
  181 LVQYIPRLYL IFPLSAEIIK ATGVVTTTAW AGAAYNLLQY MLASHILGSA WYLLSIERQA 240
  241 TCWKAECHKE SVPLQCVTDF FDCGTLHRDD RNNWQNTTVV FSNCDPSNNI QFTFGIFADA 300
  301 LTKNVVSSPF LEKYLYCLWF GLQNLSSYGQ NLSTSTSVLE TMFAILVAIF GLVLFALLIG 360
  361 NMQTYLQSIT VRLEEWRLKR RDTEEWMGHR LLPQNLRERV RRFVQYKWLA TRGVDEETIL 420
  421 HSLPADLRRD IQRHLCLDLV RRVPLFAQMD DQLLDAICER LASSLSTQGN YIVREGDPVT 480
  481 EMLFIIRGKL ESSTTNGGRT GFFNSITLRP GDFCGEELLA WALLPKSTVN LPSSTRTVRA 540
  541 LEEVEAFALQ AGDLKFVANQ FRRLHSKKLQ HTFRYYSHQW RTWAACFVQV AWRRYKRKKL 600
  601 AKSLSLAESF SSYDEEEAVA VAATEEMSHE GEAQSGAKAR HHTSNVKPHF AATILASRFA 660
  661 KNTRRTAHKL KDVEIPMLPK PDEPDFSVDD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle