YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXP21_ARATH
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLEKMTYV ECFMIIMATW FMFISYSHGA NVAAAPGTNG LDTAWYDARA AYYGDIHGGG  60
   61 TELEGACGYG DLNKHGYGLA TAALSTALFN SGASCGACYE IMCSPNPQGC LSGSIKITAT 120
  121 DLCPPGSAWC YLPNKHFDLS LPMFIKIAQV KAKMVPVRYR RVPCAKTGGV KFEVKGNPNI 180
  181 LTILPYNVGG AGDIIAVSAK GSKTAWVVMS RYWGQNWTTN VNLTGQSVSL RVTTSDGITK 240
  241 DFTDVMPASW GFGQTFDGKT NF

Type	Start	End	Confidence
Cytoplasmic	1	8	0.74
Transmembrane Helix	9	30	0.73
Non-Cytoplasmic	31	262	0.60