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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27752281
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSQKFTLLL LSLLLFLPLF LTNFITPNLA LADSPKQSQK IVGYFPSWGV YGRNYQVADI  60
   61 DASKLTHLNY AFADICWNGK HGNPSTHPDN PNKQTWNCKE SGVPLQNKEV PNGTLVLGEP 120
  121 WADVTKSYPG SGTTWEDCDK YARCGNFGEL KRLKAKYPHL KTIISVGGWT WSNRFSDMAA 180
  181 DEKTRKVFAE STVAFLRAYG FDGVDLDWEY PGVETIPGGS YRPEDKQNFT LLLQDVRNAL 240
  241 NKAGAEDGKQ YLLTIASGAS QRYADHTELK KISQILDWIN IMTYDFHGGW EATSNHNAAL 300
  301 YKDPNDPAAN TNFYVDGAIN VYTNEGVPVD KLVLGVPFYG RGWKSCGKEN NGQYQPCKPG 360
  361 SDGKLASKGT WDDYSTGDTG VYDYGDLATN YVNKNGFVRY WNDTAKVPYL YNATTGTFIS 420
  421 YDDNESMKYK TDYIKTKGLS GAMFWELSGD CRTSPKYSCS GPKLLDTLVK ELLGGPISQK 480
  481 DTEPPTNVKN IVVTNKNSNS VQLNWSASTD NVGVTEYEIT AGEEKWSTTT NSITIKNLKP 540
  541 NTEYTFSVIA KDAAGNKSQP TALTVKTDEA NTTPPDGNGT ATFSVTSNWG SGYNFSIIIK 600
  601 NNGTTPIKNW KLEFDYSGNL TQVWDSKISS KTNNHYVITN AGWNGEIPPG GSITIGGAGT 660
  661 GNPAELLNAV ISEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle