YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20151969
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEERALTGGN TSRKPSTNSA KHKPNVGYRL GKRKALFEKR KRISDYALVM GMFGIIVMVI  60
   61 ENELSSAGVY TKASFYSTAL KTLISVSTVI LLGLIVAYHA LEVQVRVSAN CILLFQMLLM 120
  121 FLLMVVIVNC LTLPSSFSLT VTIIPLEPPI NPNPKMPLYG HANPSKSFGH HQSSSSPSRF 180
  181 VCMFVS

Type	Start	End	Confidence
Cytoplasmic	1	42	0.99
Transmembrane Helix	43	60	0.95
Non-Cytoplasmic	61	78	0.81
Transmembrane Helix	79	101	0.90
Cytoplasmic	102	111	0.84
Transmembrane Helix	112	133	0.89
Non-Cytoplasmic	134	186	0.94