YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20151857
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGSSYDVLR KQARSLENEI DLKLVAFSKI GAGCGGGGSG GLGGVDTSPL LGEHVFDSLS  60
   61 EEIEQMLEKL SSLNESMSDL PASGAAAMHT LQRHREILQG YRQEFNKICA NHTMRIEREE 120
  121 LLRGSGLATS SGSPSISGLN RREMYLKESG HLNSASHLVN DQINIAIETR DHLHAQRQAF 180
  181 KRLQTRFNDI SNRFPLISSL IQRINIKKRR DSLILGAVIG FCVILLLLYA FN

Type	Start	End	Confidence
Cytoplasmic	1	211	0.96
Transmembrane Helix	212	231	0.96
Non-Cytoplasmic	232	232	0.97