YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20151425
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNSEFHQTI GELVEWLQRT EQNIKASEPV DLTEERSVLE TKFKKFKDLR AELERCEPRV  60
   61 VSLQDAADQL LRSVEGSEQQ SQHTYERTLS RLTDLRLRLQ SLRRLSGIYI VKLGAVLGYE 120
  121 GDNLGVPLHM LSSELLDNTT LSTSSMQAAA PNTENANNTD GGDAVDGDVI NTTVLARGAR 180
  181 FLGRVARASL PIQALMLLLL GVATLVPHGE DYTCMFSNTF ARSLEPMLSY PHGPPPT

Type	Start	End	Confidence
Cytoplasmic	1	187	0.72
Transmembrane Helix	188	207	0.70
Non-Cytoplasmic	208	237	0.93