YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20151259
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLLRQGLR LGCCLPAVQQ QIHTTAVHRT FWEREKKSGY KTKLPEPSKK QMIMDGLKDL  60
   61 KEEMKLWRQE VKEQFESDPI LVFRPGETDV VFDFKAPDVL DKWTVTTDAD HGEGKSTATL 120
  121 ELSAAGAGLF HGQVNSDHTK DGIIKRTGYA NIRTKRVRKS FKRETTYDWT QYNMLIMKVR 180
  181 GDGRSYLINL HTEGYFDLMW NDIYHYVLYT RGGPHWQIAK IPFSKFFLSS KGRVQDRQGA 240
  241 IPLNRVTHFG FSVAAKKGMD GPFGLEIDYV GLEYDPSHRE EFAYEMYQTP KYIVAT

Type	Start	End	Confidence
Signal Peptide	1	20	0.74
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	296	0.99