YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TL15B_ARATH
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMLFRPPPS QCRSFSPFVF NYSSREVSSS SRLSLKTSGD EENWVSRFRS KSLSLVFSGA  60
   61 LALGLSLSGV GFADAKVGVN KPELLPKEFT SVIDVADFLS NGQEKRIAQE IANLEKDTGF 120
  121 KLRVLAQNYP VTPGLAIKDF WQVDDSTIVF VADPTFGNIL NFNVGATVDL DIPRSFWSRL 180
  181 AGKYGNMFYW KEKGEDASIE AAVMAISSCL REPVGRNNCA EIQ

Type	Start	End	Confidence
Cytoplasmic	1	52	0.62
Transmembrane Helix	53	73	0.62
Non-Cytoplasmic	74	223	0.94