YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GSOX4_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPAPSPINS QHVAVIGAGA AGLVAARELR REGHTVVVLD REKQVGGLWV YTPETESDEL  60
   61 GLDPTRPIVH SSVYKSLRTN LPRECMGYKD FPFVPRGDDP SRDSRRYPSH REVLAYLQDF 120
  121 ATEFNIEEMI RFETEVLRVE PVNGKWRVQS KTGGGFSNDE IYDAVVMCCG HFAEPNIAQI 180
  181 PGIESWPGRQ THSHSYRVPD PFKDEVVVVI GNFASGADIS RDISKVAKEV HIASRASKSN 240
  241 TFEKRPVPNN NLWMHSEIDT AHEDGTIVFK NGKVVHADTI VHCTGYKYYF PFLETNNYMR 300
  301 VDDNRVEPLY KHIFPPALAP GLSFIGLPAM GLQFYMFEVQ SKWVAAVLSG RVTLPSVDEM 360
  361 MDDLKLSYET QEALGIPKRY THKLGKSQCE YLDWIADLCG FPHVEHWRDQ EVTRGYQRLG 420
  421 NQPETFRDEW DDDDLMEEAY EDFARLNLIN FHPSRFLESG R

Type	Start	End	Confidence
Signal Peptide	1	26	0.72
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	461	0.90