YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20148361, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGNKRNLGF VIFFWALVVA VVATAIEHRR NERTKGVNGL DKIIIRDRRG RSAEVYLYGG  60
   61 QVSSWKNENG EELLVMSSKA IFQPPTPIRG GIPVLFPQYS NTGPLPSHGF VRQRFWEVET 120
  121 KPPPLPSLST AHVDLIVRSS NEDLKIWPHK FEYRLRVALG HDGDLTLTSR VKNTDTKPFN 180
  181 FTFALHPYFA VSNISEIHVE GLHNLDYLDQ QKNRTRFTDH EKVITFNAQL DRLYLSTPDQ 240
  241 LRIVDHKKKK TIVVHKEGQV DAVVWNPWDK KVSDLGVEDY KRFVTVESAA VAKPITVNPG 300
  301 KEWKGILHVS VVPSNRKA

Type	Start	End	Confidence
Signal Peptide	1	25	0.86
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	318	0.99