YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14423522, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTRLGNSLL SLLIFFQRRF PDPNFGLIEF KVSVFTNQFR ESFHLFFMAA YANYLRLARL  60
   61 GGTSSGVNLS TLRSFGYSNP AFDKTQEFRS SSSSLVSYSS FRQFHARFIS QLIKTNGKRL 120
  121 FLVDTLALVR SLEAQGLPSK QAEAITGAIT EVLNDSLGVV SQLVVSKGEM QKAEMTQESN 180
  181 LSKFKSEINS SLDHHFSLLQ HENEKLRNDI ERIRSDIRHE IDKVTAGQRL DLNLEKGRIR 240
  241 DELQNQNGET SNLTNKLDRE IHTLRAQLEA AKYEVIKYCI GTLVSISAVG LAVLRIVM

Type	Start	End	Confidence
Signal Peptide	1	21	0.64
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	298	0.80