YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|10732800
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCWSPCSLL VVIVIYCLSS HTSEAFDLAQ ACVESQRLSL LPICDTIFAV QQEGVQQSAD  60
   61 DGMRSKRFIR FGRALSGDAF LRFGKNVPDL PFEDKRFLRF GRAAPQLDEL LKQALQRVES 120
  121 LQKADETSVR RKRSTDAAPQ NNAENPEQKN DSAKITKRYI DDVEDSDVKR FMRFGKRFMR 180
  181 FGRNPSDVGN KLTEKRFMRF GRDPEKRFMR FGKSDDKRFM RFGRNPSDAE DELEEDKRFM 240
  241 RFGRGGEDDE EEAEKRFMRF GRDPEKKFMR FGKSGEDKRF MRFGRNPDEQ EADKRFMRFG 300
  301 RGGEDDEVST EDKRFMRFGR SADKCKGCLE G

Type	Start	End	Confidence
Signal Peptide	1	25	0.97
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	331	0.99