YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48237775, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIASAKIFF GLSLLGVLAL GSAEQCGSQA GGAACPGGLC CSQFGWCGTT DDYCEAGCQS  60
   61 QCSSSGGDPS SLVTRDKFNQ MLKHRNDGGC PAKGFYTYDA FIAAAKSFPA FAATGDAATR 120
  121 KREIAAFLAQ TSHETTGGWA SAPDGPYAWG YCYLREQGNP GSYCVQSAQW PCVAGKKYYG 180
  181 RGPIQISYNF NYGAAGKAIG VDLLNNPDLV EKDPVVSFKT AIWFWMTPQS PKPSCHEVIT 240
  241 GRWTPSAADK SAGRVPGFGV VTNIINGGVE CGHGQDARVA DRIGFYKRYC DILGVGYGNN 300
  301 LDCYNQRPFG NGLLWATE

Type	Start	End	Confidence
Signal Peptide	1	30	0.91
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	318	0.99