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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44662948
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKLRKLTPF ILFLFIITFL AGCGSKDVTQ PPQQEEPEDL SKFYPGPPPL PDFEVKTTLI  60
   61 INYHRYEGDY RPWDLWVWPD GKEGKAYPFT ELTDYGVRAT IYFPEEYHRL GFIVRRGNWS 120
  121 AKDVDRDRFV DVIDGKAEIW LLQSDPNIYF SQADVDKSPR IISAYMDGKD EIIVSLTHQH 180
  181 KLTDGDNGFV IKGEDKDYNV KKVEVVGSGT SGNVLKLTLE KELDITANYT IESPDYTGNY 240
  241 VVKRRVLDLP EFYYPGDDLG NTYTRNSTKF RVWAPTALDV KVRIYDTADA KEGKDYDMKK 300
  301 DVNGTWFLEI KGDLKNKYYT YIVDHGYIVN EAVDPYVRAV SLNSTRGMIV DLKETNPRGW 360
  361 DSFKKPEFKN YTDAIIYEMH VRDFSIYPDS GNKYKGKYLG LIEKGITGPG GVKTGLDHLV 420
  421 ELGITHIHLL PTYDFASIDD SRDDQYNWGY DPRLYNVPQG TYSTNAADGL TRIREYKEMV 480
  481 MGLNKAGIRV IKDVVYNHTY TVGDSPFDLI VPKYFYRTDD KGNYTNGSGC GNEIASERPM 540
  541 VRKFIVDSVK YWATEYKIDG FRFDLMALHD VETMLAVQEA LHQIDPSIII YGEPWQAGGS 600
  601 PLPANLQFTK GKQRGTRIAV FNDHIRNAIK GDNDGTIKGY VQGMVNQRDN VIRGIMGAID 660
  661 DFAQEPTESI VYVSCHDNLT LWDKIEKSNP NDSEEDRIRM NLLANAIVLT SQGVPFLHGG 720
  721 VEMMRTKYGD HNSYKSPDHI NQIEWSRKHT YYEEFLYHQG LIRLRREHPA FRLATAEMVR 780
  781 KHMEILDSPD GSIMFHLKDN ANGDSWRDIV VIYNPNGHDI TVNLPKGGTW NIVVKDKKAG 840
  841 VDTLETVNGT TVKVPRISMM VLYQK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle