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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15158466, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPMPGRSVGS PLLAGMRMAC CALPPHRGSC KPTRWDGDIM ETKPVLSVRN LTTSFLVDGE  60
   61 WKSVVRDVSF DVKSGETVAI VGESGSGKSV TSLSLMRLLA PASSHIEGEV LLNGRNLLTL 120
  121 SEREMRGVRG NDISMIFQEP MTSLNPIFTI GRQISEVLIR HKGLSKQEAR AETVRLLEKV 180
  181 RIPNAASRFD EYPHQFSGGM RQRVMIAMAL ASRPKLLIAD EPTTALDVTI QGQILDLIKL 240
  241 LQEEEGMSVL FITHDMGVVA EIADRTIVMY RGDAVETGAT EDIFRRGQHP YTRALLSAVP 300
  301 KLGSMHDRQW PTRFPVLDLK TGLSTEPQEV AETVACGQTP VLSVKNLVTR FPIRSGLWAR 360
  361 QTGAVHAVEN VSFDLFQGET LSLVGESGCG KSTTGRSIMR LVEPSSGDVS LDGYDVMRLD 420
  421 TVGLRNMRKS VQMIFQDPFS SLNPRMTVGT AISEPFIKHR LGSTKQAKEK TADLLEKVGL 480
  481 SADMANRYPH EFSGGQRQRI AIARALALDP KVIVADESVS ALDVSIKAQV CNLLLDLQQS 540
  541 LNLAFLFISH DMAVVERVSH RVAVMYLGEI VEIGPRAAVF DNPQHPYTKK LMAAVPVPDP 600
  601 ARRGMRRGIS NDELKSPIRT MSYEAPTRHY RTVSPGHLVQ VE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle