YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25285628
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDNPVELAI SRRHVLLAGA ALSTAMAMPS LAFSKSIPSR NEGTFPMTES FVKNKDGVEI  60
   61 YFKDWGPKDA QPIVFHHGWP LSSDDWDAQM LFFVQNGYRV VAHDRRGHGR SQQVSDGHDM 120
  121 DHYAADASAV AEHLDLRNAV HIGHSTGGGE VARYVAKFGQ PQGRVAKAVL VSAVPPLMLK 180
  181 TPSNPGGLPI EVFDSFRKGV AENRAQFFLD VPAGPFYGFN RPDAKIYPGV IRNWWRQGMM 240
  241 GSAKAHYDGV KAFSETDQTE DLKAITVPTL VLHGDDDQVV PIADSAELSV KLLKNGTLKV 300
  301 YKGYPHGMLT THADVINPDL LAFVKG

Type	Start	End	Confidence
Signal Peptide	1	32	0.89
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	326	0.99