YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15162184, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASDTDRFFV SRRSVLLGSL ALASVSVPAL AFSHTSSTDG SSQGDIDMGF VTTKDGTEIF  60
   61 YKDWGPKDAQ PIVFHHGWPL SSDDWDAQML FFLSKGYRVV AHDRRGHGRS AQVADGHDMD 120
  121 HYAADAFAVV QALDLKNAVH IGHSTGGGEV ARYVAKHGQK AGRVAKAVLV SAVPPLMVKT 180
  181 TANPEGLPIE VFDGFRSALA ANRAQFFRDV PAGPFYGFNR DGAKVQEGVI QNWWRQGMMG 240
  241 GAKAHYDGIK AFSETDQTED LTAITVPTLV LHGEDDQIVP IADAARKSIK LLKNGQIKTY 300
  301 PGFSHGMLTV NADVLNQDLL AFIKG

Type	Start	End	Confidence
Signal Peptide	1	31	0.99
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	325	0.99