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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AHK3_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFHVLGFG VKIGHLFWML CCWFVSWFVD NGIEDKSGLL VGSVGDLEKT KMTTLKKKNK  60
   61 MWFWNKISSS GLKIPSFSYQ FLGSVKFNKA WWRKLVVVWV VFWVLVSIWT FWYFSSQAME 120
  121 KRKETLASMC DERARMLQDQ FNVSMNHVQA MSILISTFHH GKIPSAIDQR TFSEYTDRTS 180
  181 FERPLTSGVA YAMRVLHSER EEFERQQGWT IRKMYSLEQN PVHKDDYDLE ALEPSPVQEE 240
  241 YAPVIFAQDT VSHVVSLDML SGKEDRENVL RARSSGKGVL TAPFPLIKTN RLGVILTFAV 300
  301 YKRDLPSNAT PKERIEATNG YLGGVFDIES LVENLLQQLA SKQTILVNVY DITNHSQPIS 360
  361 MYGTNVSADG LERVSPLIFG DPLRKHEMRC RFKQKPPWPV LSMVTSFGIL VIALLVAHII 420
  421 HATVSRIHKV EEDCDKMKQL KKKAEAADVA KSQFLATVSH EIRTPMNGVL GMLHMLMDTE 480
  481 LDVTQQDYVR TAQASGKALV SLINEVLDQA KIESGKLELE EVRFDLRGIL DDVLSLFSSK 540
  541 SQQKGVELAV YISDRVPDML IGDPGRFRQI LTNLMGNSIK FTEKGHIFVT VHLVDELFES 600
  601 IDGETASSPE STLSGLPVAD RQRSWENFKA FSSNGHRSFE PSPPDINLIV SVEDTGVGIP 660
  661 VEAQSRIFTP FMQVGPSISR THGGTGIGLS ISKCLVGLMK GEIGFSSTPK VGSTFTFTAV 720
  721 FSNGMQPAER KNDNNQPIFS EFRGMKAVVV DHRPARAKVS WYHFQRLGIR VEVVPRVEQA 780
  781 LHYLKIGTTT VNMILIEQEI WNREADDFIK KLQKDPLFLS PKLILLANSV ESSISEALCT 840
  841 GIDPPIVIVK PLRASMLAAT LQRGLGIGIR EPPQHKGPPA LILRNLLLGR KILIVDDNNV 900
  901 NLRVAAGALK KYGADVVCAE SGIKAISLLK PPHEFDACFM DIQMPEMDGF EATRRIRDME 960
  961 EEMNKRIKNG EALIVENGNK TSWHLPVLAM TADVIQATHE ECLKCGMDGY VSKPFEAEQL1020
 1021 YREVSRFFNS PSDTES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle