YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52420900
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLMRMRPSR FSINNLPRFR DVITGRDAHP CAIKITMKRK RLFLLASLLP MFALAGNKWN  60
   61 TTLPGGNMQF QGVIIAEACR IEAGDKQMTV NMGQISSNRF HAVGEDSSPV PFVIHLRECS 120
  121 TVVSERVGVA FHGVADGKNP DVLSVGEGPG IATNIGVALF DDEGNLVPIN RPPANWKRLY 180
  181 SGSTSLHFIA KYRATGRRVT GGIANAQAWF SLTYQ

Type	Start	End	Confidence
Signal Peptide	1	55	0.87
N-region	1	46
H-region	47	52
C-region	53	55
Cleavage Site	55	56
Non-Cytoplasmic	56	215	0.99