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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52353232
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGSVGNSLK QKMILVIYLW FTNLSIVFGN NHMVGFGEQP LSKIAIYSTV LALHSSASIT  60
   61 ASPFSLGNSN EGDDTDWVTV ELESPKPSID DWVGVFSPAK FDSETCPGTE NHVGHIEAPY 120
  121 VCTAPIKYKY ANHSDSNYVK TGKATLKFQL INQRADFAFA LFSGGLSNPN LVAVSNNISF 180
  181 VNPKVPVYPR LALGKSWDEM TVTWTSGYNI DEAVPFVEWG PTGGRKTRSP AGTLTFDRNS 240
  241 LCGEPARTVG WRDPGFIHTS FLKELWPNQR YTYRLGHILS NGSYVKSKKY SFKGAPYPGQ 300
  301 NSLQRVIIFG DMGKAERDGS NEYANYQPGS LNTTDQLIKD LDNYDIVFHI GDLPYANGYI 360
  361 SQWDQFTAQV QKITSRVPYM IASGNHERDW PNSGSFFDTP DSGGECGVLA ETMYYFPAEN 420
  421 RAKFWYKADY GMFRFCIADS EHDWREGSEQ YKFIEHCLAT VDRKHQPWLI FSAHRPLAYS 480
  481 SNAWYGMEGS FEEPEGREHL QKLWQKYKVD IAFYGHVHNY ERICPIYQNQ CVNSEKTHYS 540
  541 GTVNGTIHVV VGGGGSHLSD YTPSPPVWSV FRDRDFGFGK LTAFNHSYLL FEYKRSSDGN 600
  601 VYDFFTISRD YRDVLARVHD GCDKTTLAT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle