YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12057225
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTRITAVLA AGLLAGCQNQ AFNEIGRAPA MSPIGSGLQY TQTPQLAMYP KQPRHVTNGY  60
   61 SLWNDQQAAL FKDARAINIG DILTVDIRID DKASFENETD RSRTNSSGFN LGASGQSQTS 120
  121 DFAWSGDLEY GSNTKTEGDG KTERSEKLRL LVAAVVTGVL ENGNLLISGS QEVRVNHELR 180
  181 ILNVAGIVRP RDVDADNVIS YDRIAEARIS YGGRGRLTEV QQPPWGQQLV DLVSPL

Type	Start	End	Confidence
Signal Peptide	1	21	0.95
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	236	0.99