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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16506680
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGASRRSAR GRIKSSSLSP GSDEGSAYPP SIRRGKGKEL VSIGAFKTNL KILVGLIILG  60
   61 IIVIYFVINR LVRHGLLFDE SQKPRVITPF PAPKVMDLSM FQGEHKESLY WGTYRPHVYF 120
  121 GVRARTPLSL VAGLMWLGVK DEMYVMRHFC ENSDDLSTFG WREHNGRDYG RQELVENDMV 180
  181 IETSFVKSKG DGLGYGGDWA VRIDVKNKGL NDDVKRSAHL FFYLADEGGN VLNLGQDGLD 240
  241 FQGSSLLVSG SREDVGDWQI HLKSQNQLET HYSGFKTPHI YNLSDLVQQN LALQARKFGR 300
  301 LQLSDTSEDS SNIYIFQISG RLPFTIDIPF ISGIKGESSN VEKRLTSLTG LPLSDLLKKK 360
  361 HQEFDAKFNE CFKLSEKHDS ETLGVGRTAI ANMLGGIGYF YGQSKIYVPK STQPGSRDNF 420
  421 LLYWPAELYT AVPSRPFFPR GFLWDQGFHQ LLIWRWDIRI TLDIVGHWLD LLNIDGWIPR 480
  481 EQILGAEALS KVPEEFVVQY PSNGNPPTLF LVIRDLIDAI RMEKFVASEK DEVLSFLERA 540
  541 SVRLDAWFQW FNTSQKGKEI GSYFWHGRDN TTTQELNPKT LSSGLDDYPR ASHPSEDERH 600
  601 VDLRCWMYLA ADCMHSITEL LGKEDKLSKE NYNSTVKLLS NFNLLNQMHY DSDYGAYFDF 660
  661 GNHTEKVKLI WKEVIQENGQ LSRQLVRKTF GKPKLKLVPH LGYVSFFPFM SRIIPPDSPI 720
  721 LEKQLDLISN RSILWSDYGL VSLAKTSSMY MKRNTEHDAP YWRGPIWMNM NYMILSSLYH 780
  781 YSIVDGPYRE KSKAIYTELR SNLIRNVVRN YYETGYIWEQ YDQVKGTGKG TRLFTGWSAL 840
  841 TLLIMSEDYP IF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle