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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88598848, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.23
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSSNHIRNI LVFFCGLFCL LEFCFYISGV LFVLLVWGVD YLDFNAINPS VSDFPMRLWP  60
   61 TIFQYISKWW GDPKLFGIAN SLKLWGSFFA PIGLVCLVAW NLRHVLIDWR PFKKKESLHG 120
  121 DSRWASERDI RKIGLRSRRG ILLGKDQRGY LVADGYQHAL LFAPTGSGKG VGFVIPNLLF 180
  181 WEDSVIVHDV KLENYDLTSG WRKKIGQEVY VWNPAQPDGI SHCYNPLDWI SKKPGQMVDD 240
  241 VQKIANLIMP EQDFWYNEAR SLFVGVVLYL LAVPEKVKSF GEVVRTMRSD DVVYNLAVVL 300
  301 DTIGKKIHPV AYMNIAAFLQ KADKERSGVI STMNSSLELW ANPLIDTATA SSDFNIQDFK 360
  361 RKRVSVYVGV TPDNLTRLRP LMQVFYQQAT EFLCRTLPSD DEPYGVLFLM DEFPTLGKME 420
  421 QFQTGIAYFR GYRVRLFLII QDTEQLKGIY EEAGMNSFLS NSTYRITFAA NNIETANLIS 480
  481 QLIGNKTVSQ ESLNRPKFLD LNPASRSLHI SDTQRALLLP QEVIMLPKDE QILLIESTYP 540
  541 IKSRKIKYFE DKTFTRRLLK STFIPTQEPY DPEKIRGGVE GEAGIVSEAS ENSEDLKALM 600
  601 GSSSAENPPE RAEYGYEDDG DLVDREEFED LYGIGEEPED DLEDLDESDD YFHDEDDVLN 660
  661 DEDYDDPYED DMELEGDGDW DENEAFEDEL LDDEVVDDEF DSLEPEEDED FEEDDSLEEE 720
  721 DEFGEDRPTD DNDSSNGRLK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle