YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88607325, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNFYKNFYV ALVTAFALFS MSKACFASTN IGVPVSVDSR IKTFVYSQNE VFPVVFNYGY  60
   61 HSYIEFSQGE TVRVMALGDN ANWKIRPVDN KLYVMPLEKE GHTNMLIETS KGRSYAFDLI 120
  121 STAIPLSGGA ASSINKLGKT NSALADLAYV VRFYYPQSDR NFDIMGQKLE ISPPSLASSL 180
  181 DADDVEIEPN ATRTNYMFTG GSAHVSLAPT QAFDDGYLTY FQFGKNNKEI PKIYVVKKDG 240
  241 KKVPCKMLLL RDYVIVEGVH ELFYLDFGDG RSVEVVNQAL S

Type	Start	End	Confidence
Signal Peptide	1	27	0.97
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	281	0.99