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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88599023, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSVSANHIR NILFLVLGAF FGLEFCFYLS GVLFILMVWG PDYLDFNAIN PSFSDFPDRI  60
   61 WPTVFNYVEH WWHNPSSYDA ILLVKLISSL CIPIGILSIV LWNLRNILFD WRPFKKKESL 120
  121 HGDSRWATEK DIRKIGLRSR KGILLGKDKR GYLIADGFQH ALLFAPTGSG KGVGFVIPNL 180
  181 LFWEDSVIVH DIKLENYDLT SGWRKKRGQE VFVWNPAQPD GVSHCYNPLD WISSKPGQMV 240
  241 DDVQKIANLI MPEQDFWYNE ARSLFVGVVL YLLAVPEKVK SFGEVVRTMR SDDVVYNLAV 300
  301 VLDTIGKKIH PVAYMNIAAF LQKADKERSG VVSTMNSSLE LWANPLIDTA TASSDFNIQE 360
  361 FKRKKVTVYV GLTPDNLTRL RPLMQVFYQQ ATEFLCRTLP SDDEPYGVLF LMDEFPTLGK 420
  421 MEQFQTGIAY FRGYRVRLFL IIQDTEQLKG IYEEAGMNSF LSNSTYRITF AANNIETANL 480
  481 ISQLIGNKTV NQESLNRPKF LDLNPASRSL HISETQRALL LPQEVIMLPR DEQILLIEST 540
  541 YPIKSKKIKY YEDKNFTKKL LKSTFVPTQE PYDPNNVKIT KKENEDPIPS IESDIPENKP 600
  601 NNTENNLTEE GAIYNSTETN YEDDEDEDDD FNFDDLDEYI DEDEEYSEQP EEDYDYTDEE 660
  661 DEDEEEDEED NDYNNSNEDD DYENNNISNS HHENDFDNHN EKPVKDQDIK NDKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle