YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88600104, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNFYKIYTI LLLVLVMMFN SSAYAINRVD NPVTVDSRIK TFVYSNNEIY NVVFNYGYHS  60
   61 YIEFSKGETI KMLAMGNTVS WKVKPVGNKL FIMPLEKNGR TNMLIETNKG RSYAFDLICR 120
  121 SANESSDDNN DQAGYSDLID LTYIVRFYYP KTEEDFELNQ VKLPDISVPS AVQKIKKHVV 180
  181 IKPNNTSNHY ILETKSENQN ILPVELFDDG KLTYFKFSND NQIIPQIFIY NNSEKKVPCK 240
  241 MLLLQNYVII KGVHKNLYLE YKSESVKITN KKL

Type	Start	End	Confidence
Signal Peptide	1	25	0.98
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	273	0.99