YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88657917, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRMFNKFRK KNNKNDNNKL SNANLETTYS WHVSRYNSVV IQRNMLLFFT MLALSAVGIS  60
   61 VFVIFNISKN RTIEPFVVEI EKKSGITTLV NPVSVKQYSA DEVLNNHFII EYVRSRELFD 120
  121 PNNFQYNYYT KVRLFSNQTT YSEFRNWIRL SNPASPLNLY ANVTSGYLKI RSLQHLRPGS 180
  181 VQIRFSLEFN HPSGIIKKDR IATLSFQYVT LEMNEQERQI NPLGFQITYY RADDEFL

Type	Start	End	Confidence
Cytoplasmic	1	44	0.85
Transmembrane Helix	45	67	0.91
Non-Cytoplasmic	68	237	0.86