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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18000042
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVRRRSEKP AYPTKEFAAG EKPLKPHKQQ QQQDNSLLIA SDALPLPLYL TNGLFFTMFF  60
   61 SVMYYLLSRW REKIRNSTPL HVVTFSELVA IVSLIASVIY LLGFFGIGFV QSFVSRDNND 120
  121 DSWDVEDEND EQFLLEEDSR RGPATTLGCT AVPPPPARQV VPMVPPQPAK VAAMSEKPAP 180
  181 LVTPAASEED EEIIKSVVQG KMPSYSLESK LGDCKRAASI RKEALQRITG KSLEGLPLEG 240
  241 FDYESILGQC CEMPIGYVQI PVGIAGPLLL DGREYSVPMA TTEGCLVAST NRGCKAIYAS 300
  301 GGATSVLLRD GMTRAPCVRF GTAKRAAELK FFVEDPVKFE TLAAVFNQSS RFARLQRIQC 360
  361 AIAGKNLYMR FVCSTGDAMG MNMVSKGVQN VLDYLQNEYP DMDVIGISGN FCSDKKPAAV 420
  421 NWIEGRGKSV VCEAIITEEV VKKVLKTEVA ALVEPNMLKN LTGSAMAGAL GGFNAHASNI 480
  481 VSAVFIATGQ DPAQNIESSH CITMMEAVND GKDLHVSVTM PSIEVGTVGG GTQLASQSAC 540
  541 LNLLGVKGAN REAPGSNARL LATIVAGSVL AGELSLMSAI SAGQLVKSHM KYNRSTKDVT 600
  601 KASS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle