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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SADA_DICDI
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSQKIGSMI LLIGILLAIF NFAYSDDDIE RFSINPEKPI SFTSDQPGFP TSADFPIGSI  60
   61 LANSFYSFGG DVNYFQLNIS LMEEFSKDGN TGSQATWNQY TSVPVSPISS AVTANRVYTM 120
  121 SIGSLNRVKK GDITSMESTD FLNDEKYSSL VTTLNGGVSY GDDVFFLSSK SATGEAVLIH 180
  181 INDTATGTFG TSSYDEILLD AAINDPSSIT VDSKLGLAFI GDSDGDILVF NMTLKAKIAI 240
  241 YSNSSIANLR SSGVVDEERQ LLYICGQAGG MNSYITQVDI FHYSATDITL LHSFTILGSL 300
  301 CPSAGIDVKG GQLFFSTTTS SGSQLIGTDT SGGNTGSLSE NIANTQSVAI SVDSITKTIS 360
  361 VFYPDSVFYG TFKSICPSDC SGHGECNYGT CVCDHNYQGQ GCEEELCLTL NNCTGTDNGK 420
  421 CENGFCYCSS EWEGAQCEIR RCKDSCNGYG TCNTANYTCV CDSAHMGETC NELVPPPPCT 480
  481 YYTDSESCLS RTTCGWCEVD GLCKEGDRYG PFEGFCRTWF FDTNVETGVI ALACIFIAFV 540
  541 GILYIIDIGT TVPIDIKRAK DYAEENKSGQ FPKATHEEAS VLWWRDQRSH KAWTFMDQFQ 600
  601 LISLVSHIGV VFPSRFISFT EYLDWSNLGI PLPPSINPPQ IWSVPTDWTS NTARTILSMA 660
  661 QYENSLGSGD LYLLPNILFW FGLLLGVFLV PLLLAYAIIS FMESLIHWKE VVTNRLIHVL 720
  721 VRILTFGYIG VLIAASFAMV TPLHDYRIII PGAIIFVLYG IGLPIAIWFL LAVPEARLHN 780
  781 PTFKQRFGCL YVHYKPKTDH RFVVFMFIKR FIMAVIIGIL SFKPMTNYPL TGTDLAVPIV 840
  841 QVVVIDIALI GYAVLLFIRK PYFDHYQLWL EYLLTAINIV TVSLSLTHIK SPSAAGELIA 900
  901 CLIQALALVA CIAAYVVAWL QMRSSFIKKV KKYLCCCCKS SKSSGEIDLS KK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle