YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27463527
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALECVGGAV LSSFLGALFQ KLASPQVLDF FRGTKIDQNL RRDLENKLLS IQAVLDDAEQ  60
   61 KQFGNMPVRD WLIELKVAML DVEDVLDEIQ HSRLQVQPQS ESQTCTCKVP NFFKSSPVSS 120
  121 FNKEINSSMK NVLDDLDGLA SRMDSLGLKK ASDLVAGSGS GGNKLQSTSL VVESDICGRD 180
  181 GDKEMIINWL TSYTYKKLSI LSIVGMGGLG KTTLAQLVYN DPRIVSMFDV KGWICVSEEF 240
  241 DVFNVSRAIL DTITDSADDG RELEIVQRRL KERLADKKFL LVLDDVWNES GPKWEAVQNA 300
  301 LVYGAQGSKI LVTTRSEEVA STMGSDKHKL EQLQEGYCWE LFAKHAFRDD NLPRDPVCTD 360
  361 ISKEIVEKCR GLPLALKSMG SLLHNKPAWE WESVLKSEIW ELKNSDIVPA LALSYHHLPP 420
  421 HLKTCFAYCA LFPKDYVFDR ECLIQLWMAE NFLNCHQCST SPEEVGQQYF NDLLSRSFFQ 480
  481 QASQYEEGFV MHDLLNDLAK YVCGDIYFRL GVDQAKCTQK TTRHFSVSMI TKPYFDEFGT 540
  541 SCDTKKLRTF MPTSWTMNEN HSSWSCKMSI HELFSKLKFL RVLSLSHCLD IKELPDSVCN 600
  601 FKHLRSLDLS ETGIKKLPES TCSLYNLQIL KLNHCRSLKE LPSNLHELTN LHRLEFVNTE 660
  661 IIKMPPHLGK LKNLQVSMSS FNVGKRSEFT IQKFGELNLV LHERLSFREL QNIENPSDAL 720
  721 AADLKNKTRL VELKFEWNSH RNPDDSAKER DVIVIENLQP SKHLEKLSIR NYGGKQFPNW 780
  781 LSDNSLSNVE SLVLDNCQSC QRLPSLGLLP FLENLEISSL DGIVSIGADF HGNSTSSFPS 840
  841 LERLKFSSMK AWEKWECEAV TGAFPCLKYL SISKCPKLKG DLPEQLLPLK KLKISECKQL 900
  901 EASAPRALEL KLELEQQDFG KLQLDWATLK TLSMRAYSNY KEALLLVKSD TLEELKIYCC 960
  961 RKDGMDCDCE MRDDGCDSQK TFPLDFFPAL RTLELNGLRN LQMITQDQTH NHLEFLTIRR1020
 1021 CPQLESLPGS TSLKELAICD CPRVESFPEG GLPSNLKEMH LYKCSSGLMA SLKGALGDNP1080
 1081 SLKTLRIIKQ DAESFPDEGL LPLSLACLVI RDFPNLKKLD YKGLCHLSSL KKLILDYCPN1140
 1141 LQQLPEEGLP KSISFLSIEG CPNLQQLPEE GLPKSISFLS IKGCPKLKQR CQNPGGEDWP1200
 1201 KIAHIPTLFI P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle