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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27451613
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQERSLCSL FIRGQRSRFP SGAHSHVTHL HGCIRECRRE NRIQGSDGKA SLSIWGWGGL  60
   61 GVVLFLVTFG PFAIFYLAFY IFCFIGGGFA VTLLYGKINS EKQLEQCEQS YLPPTQIGIL 120
  121 KTLDEMKLEM KPIKIDRRLT GSSFIDEPLQ QVIQFALRDY IQYWYYTLSE DESFLLEIRQ 180
  181 TLQNALVQFC TRXKEVDWQP YFTTRLVDDF ATHLRVFRKA QDRLADREDK QRDITEELVD 240
  241 SFFEAEVEME RKICRDVVCV SRKDEEGFLR DLCELLLYLL LPPGDFHNKN MRYFLREVLA 300
  301 CGVLLPLINQ LSDPDYINQF VIWMIRDSSC NYEAFMNILK LTDKPAELEA VKDKVAEELQ 360
  361 YLRSLDTAGD DINVIKNQIN SLLFVKKVCE TRIQRLKSGK EVDALKLAAS FGKLCVIPLD 420
  421 HILVHNIALQ FFMDFMQSAG AQAELFFWLT VEGYRVTAQQ QLEAMQVWQK DGKKHPSATK 480
  481 GLLKAAALGV YEQYLSDKAS PRVQVDQESV IKLGDKLQKD DPTPEIFDEI QRNVYDLMLH 540
  541 DERYYPSFKQ SPLYVRMLAE LDMLKEPSYR GSDDGEGESF NGSPTGSISL SLDDLSNSCH 600
  601 DESMHIHAFI SDTGVCNDHG KTYALYAITV YRRNQDGSEE CWKTYRRYSD FHDFHMRITE 660
  661 QFENLASILK LPGKKTFNNM DRDFLEKRKK DLNAYLQLLL NPEMVKACPT LIPYVYDFLE 720
  721 NKAYSKGKGE FARKIDTFVN PLRSSMRNVS NAVKALPDSL AEGMNKVSDN MGRMSERLGQ 780
  781 DIKQSILKVP PLLPKSDIDP EHCRVSAQLD DNVDDNIPLR VMLLLMDEVF DLKEKNQWLR 840
  841 RNIKNLLQQL IRATYGDTIN RRGHTLVINK CGNVHEILTL FSCFYRKIVD HVDYLTSPEQ 900
  901 VAEYVKKFRD SYWPNGILAE TPPRRDKNIR MRTRVAAKTS LLGIMPDELK HIIGADTTRK 960
  961 GILRVFDMFQ HQPMNRRLVY VFLEGFLETM FPQYKFPELF VKLHSRSPRV HRYGQRIKCS1020
 1021 SLKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle