YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48121956
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSQLSKRII EKIVILCCFL KLIIAGVLQQ RFPCAPIDAI AANGAAVPVT CALKSIGGKV  60
   61 EPVFPTYVKV SSPISYRLLP KTSSLVYVAP PIIKTASAVV ATDTKNEKEA EYMAYPRYSF 120
  121 NYGVLDGYTG DSKSAWEERD GDTVKGEYSV VEADGSIRTV TYTADDHNGF NAVVTRNEPP 180
  181 KNVVKQDGNL KAFLPVTIVP NPR

Type	Start	End	Confidence
Signal Peptide	1	29	0.59
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	203	0.95