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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VM3BE_BOTER
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQVLLVIIC LEAFPYQGSS IILESGNVND YEVVYPRKVT ALSKGAVHPK YEDAMQYEFK  60
   61 VNGEPVVLHL EKNKGLFSED YSEIHYSPDG REITTYPLVE DHCYYHGRIQ NDADSSASIS 120
  121 ACNGLKGHFK LQGEMYLIEP FKLPDSEAHA VFKYENVEKE DEAPKMCGVT ETNWESDEPI 180
  181 KKASLLNLTP EQQAYLDAKK YVEFVVVLDH GMYKKYKDDL DKIKRRIYEI VNTMNEMFIP 240
  241 LNICVALTGL EIWSKGDKIN VTSESWFTLI LFTNWRGADL LKRKSHDNAQ LLTNTDFDGS 300
  301 TIGRAHIGSM CHPYLSVGII QDYSPVNLLV ASTMAHEMGH NLGMHHDNDT CTCGAPSCVM 360
  361 AAAISKDPSK LFSNCSQEYQ RKYLIKNRPQ CLLNKPLRTD IISPPVCGNE LLEVGEECDC 420
  421 GTPENCRDPC CNATTCKLTP GSQCVEGLCC DQCRFRKTGT ECRAAKHDCD LPESCTGQSA 480
  481 DCPMDDFQRN GHPCQNNNGY CYNGKCPTME NQCIDLVGPK ATVAEDSCFK DNQKGNDYGY 540
  541 CRKENGKKIP CEPQDVKCGR LYCNDNSPGQ NNPCKCIYFP RNEDRGMVLP GTKCADGKVC 600
  601 SNRHCVDVAT AY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle