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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AATPD_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEYWTSLAS LLGVLAFCQS LMNSVFPPEL RFAISKLFNK FFKLFSTFCY FDITEIDGVN  60
   61 TNELYNAVQL YLSSSVSIAG NRLSLTRAVN SSSVTFGLSN NDSIVDTFNS VTVVWEHIVT 120
  121 QRQTQTFAWR PMPEEKRGFT LRIKKKDKNL ILDSYLDYIM EKANEIRRLN QDRLLYTNSR 180
  181 GGSLDSRGLP WESVPFKHPS TFDTLAMDPV KKQQIMEDLK DFAECQSFYE RTGRAWKRGY 240
  241 LLYGPPGTGK SSMIAAMANY LRYDIYDLEL TEVKSNSELR KLLMKTSSKS IIVIEDIDCS 300
  301 INLTNRNKKQ STGSYNEPEM LTGSGLGDDL GDGNTITLSG LLNFTDGLWS CCGSERIFVF 360
  361 TTNHIEKLDP ALLRSGRMDM HIHMSYCTFS SVKILLRNYL GFEEGDLNDV VLKELAEVVD 420
  421 RAEITPADVS EALIKNRRDK ERAVRELLVD LRSRVERNEK NGKSRVQNVS LEEQENRAFD 480
  481 SLYAEENGGE EEEIEDNICK SSDDCS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle