YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KPRS3_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAISPANAT TAASLSLPQF SSTSSSLSSS SSPSFLNFKT ASVSNRCIKC GVRSLENHSG  60
   61 HRSLDFLSNG DPISLINPNS SSPITMAAAT SESGSKSSKR VCLFHSDETR DLAERIVAKS 120
  121 DCIELRSINW KKFDDGFPNL FIQNAQGIRG QHVAFLASFS SPAVIFEQLS VIYALPKLFV 180
  181 SSFTLVLPFF PTGTSERMED EGDVATAFTL ARILSNIPTS RGGPTSLVTF DIHALQERFY 240
  241 FGDTILPCFE SGIPLLKSRL QSLPDSDNIS IAFPDDGAWK RFHKQLQHYP TIVCNKVRMG 300
  301 DKRIVRIKEG DAEGRHVVIV DDLVQSGGTL IECQKVLAAH GAAKISAYVT HGIFPRSSWK 360
  361 RFKLDTKGDP AEGLSYFWIT DSCGMTVKEV MNKPPFEVLS LAGSIASALQ V

Type	Start	End	Confidence
Signal Peptide	1	28	0.92
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	411	0.98