YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GTOMC_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKATLAAPSS LTSLPYRTNS SFGSKSSLLF RSPSSSSSVS MTTTRGNVAV AAAATSTEAL  60
   61 RKGIAEFYNE TSGLWEEIWG DHMHHGFYDP DSSVQLSDSG HKEAQIRMIE ESLRFAGVTD 120
  121 EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF 180
  181 QVADALDQPF EDGKFDLVWS MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG 240
  241 EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR 300
  301 TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL

Type	Start	End	Confidence
Signal Peptide	1	23	0.81
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	348	0.98