YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190660988, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQASGNLSG NMHQPPPSGG RFPVDLQSLP SLSNLPSPLQ IFQMVRNSLR PWVVFFNINN  60
   61 FKTAVSMQRL NSRVIRNLSY FQANYVFIFF VLMIYCLITA PCILLVILAA AFGCHKLRVR 120
  121 NSNITIVGQQ LTPSQQIIAL NLATAPVLFL VGAGAVLFWT LGASCFVIAM HAIFYNIDAI 180
  181 VTEENEGFLA QVV

Type	Start	End	Confidence
Cytoplasmic	1	84	0.69
Transmembrane Helix	85	112	0.86
Non-Cytoplasmic	113	141	0.59
Transmembrane Helix	142	170	0.76
Cytoplasmic	171	193	0.62