YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51997118
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIHTGVTEAV VVVGAGQAGA QTVTSLRQRG FEGQITLLGD EPALPYQRPP LSKAFLAGTL  60
   61 PLDRLYLRPA AFYQQAHVDV MVDTGVSELD TENRRIRLTD GRAISFDHLV LATGGRPRPL 120
  121 ACPGADHPRV HYLRTVTDVD RIRSQFHPGT RLVLVGGGYI GLEIAAVAAE LGLTVTVLEA 180
  181 QTTVLARVTC PTVARFFEHT HRRAGVTIRC ATTVTRIHDS SSTARIELDS GEYIDADLVI 240
  241 VGIGLLPNVD LASAAGLTCE SGIVVDSRCQ TSAPGIYAAG DCTQYPSPIY GRPLHLESVH 300
  301 NAIEQAKTAA AAILGRDEPF RQVPWFWSDQ YNIKLQTAGV NEGYDDVIIR GDPASASFAA 360
  361 FYLRAGKLLA VDAINRPREF MASKTLIAER AEVDPTQLAD ESLPPTALAA AVNGPTRATS 420
  421 PTSL

Type	Start	End	Confidence
Signal Peptide	1	20	0.50
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	424	0.96