YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27362892
Protein type:	Transmembrane
Type Confidence:	0.51
Topology Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRWFAILGS SCIKPRFFGV FCYLATNNWA IRPFFYVLGV DLSTLEQKLT EMISAPVAAL  60
   61 GYELVGIEFI RSRQSTLRIY IDSEDGITVD DCADVSHQVS AVLDVEDPIT VAYNLEVSSP 120
  121 GLERPLFTAA HYLHFVGEEV TVVLRMAVQN RRKWLGVIKA VDGEMITITV EGKDEVFALS 180
  181 NIQKANLVPH F

Type	Start	End	Confidence
Cytoplasmic	1	16	0.41
Transmembrane Helix	17	31	0.46
Non-Cytoplasmic	32	191	0.74