YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27356910
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSKEPRLQ QLGLLEEEQL RGLGFRQTRG YKSLAGCLGH GVLVLQLLSF TLLAGLFVQV  60
   61 SKVPSSISQE QSRQDSIYQN LTQLKAAVGE LSEKSKLQEI YQELTQLKAA VSELPEKSKQ 120
  121 QEIYQELTQL KAAVSELPEK SKLQEIYQEL TQLKAAVSEL PEKSKLQEIY QELTRLKAAV 180
  181 DELPEKSKLQ EIYQELTRLK AAVDELPEKS KLQEIYQELT QLKAAVGELP EKSRLQEIYQ 240
  241 ELTQLKAAVE RLCHPCPWEW TFFQGNCYFI SNSQRNWHDS ITACQEVGAQ LVVIKSAEEQ 300
  301 NFLQLQSSRS NRFTWMGLSD LNQEGTWQWV DGSPLLPSFK QYWNRGEPNN VGEEDCAEFS 360
  361 GNGWNDDKCN LAKFWICKKS AASCSRDEEQ FLSPAPATPN PPPA

Type	Start	End	Confidence
Cytoplasmic	1	35	0.93
Transmembrane Helix	36	58	0.89
Non-Cytoplasmic	59	404	0.99