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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PTC52_ARATH
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAALAACAL PSLRILNTKP RFRCSFSNPS LPISPNSLIT RKSSRFTTAV SSPPSSSAAT  60
   61 STNSPPEPEA LFEPGSDKFD WYANWYPVMP ICDLDKKVPH GKKVMGIDLV VWWDRNEKQW 120
  121 KVMDDTCPHR LAPLSDGRID QWGRLQCVYH GWCFNGSGDC KLIPQAPPDG PPVHTFKQAC 180
  181 VAVYPSTVQH EIIWFWPNSD PKYKNIIETN KPPYIPELED PSFTKLMGNR DIPYGYDVLV 240
  241 ENLMDPAHVP YAHYGLMRFP KPKGKYIICI SNSCFNPFTN LQILLAEKID REGGKPLEIN 300
  301 VKKLDNKGFF SKQEWGYSNF IAPCVYRSST DPLPEQEHEY PAPAASDKAA LSKRRLSLIF 360
  361 ICIPVSPGRS RLIWTFPRNF GVFIDKIVPR WVFHIGQNTI LDSDLHLLHV EERKILERGP 420
  421 ENWQKACFIP TKSDANVVTF RRWFNKYSEA RVDWRGKFDP FLLPPTPPRE QLFDRYWSHV 480
  481 ENCSSCKKAH KYLNALEVIL QIASVAMIGV MAVLKQTTMS NVARIAVLVA AVLSFAASKW 540
  541 LSHFIYKTFH YHDYNHAVV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle