YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27311819
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLGLSFPP AAKTPTYLAS SSSTFFSNSS LSVRTSQFRS RNSVFACVKC DMPESLNVGN  60
   61 GNPSIPIINE RTLPKFLESA RMEKSVNRTN TRLKLFSGTA NPALAQEIAW YMGLDLGKVN 120
  121 IKRFADGEIY VQLQESVRGC DVYLVQPTCT PTNENLMELL IMVDACRRAS AKKVTAVIPY 180
  181 FGYARADRKT QGRKSIAAKL VANLITEAGA DRVLACDLHS GQSMGYFDIP VDHVYCQPVI 240
  241 LDYLASKSIP SEDLVVVSPD VGGVARARAF AKKLSDAPLA IVDKRRSGHN VAEVMNLIGD 300
  301 VRGKVAIMVD DMIDTAGTIV KGAALLHQEG AREVYACCTH AVFSPPAIER LSGGLLQEVI 360
  361 VTNTLPVAEK NYFPQLTILS VANLLGETIW RVHDDSSVSS IFL

Type	Start	End	Confidence
Signal Peptide	1	32	0.54
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	403	0.99