YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TL16_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSLLCSST LNPFFSTTLS SSKKNQIAYS GNSKNQTSSS LLWKRRELSL GFMSSLVAIG  60
   61 LVSNDRRRHD ANAAILEADD DEELLEKVKQ DRKKRIERQA VLNSAVKEKG YLQDLVYKLS 120
  121 KVGQAIENND LPAAGLVLGK GIDTEWVKTV NLAFTKLSTS PEENTEVEAF NSSLASLITS 180
  181 VNKNDIESSK LAFVSSAGAF EKWTTLTGLL EQLKGL

Type	Start	End	Confidence
Signal Peptide	1	20	0.93
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	216	0.99