YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19528425
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIFSKSLLF RGVGGRHYSA AAQAQLREIL GTQLAGIKDA GTFKAERIIT SSQSTQITVQ  60
   61 GSDKKILNFC ANNYLGLANN PEIVEHSQKL LEQYGAGLSS VRFICGTQDI HKQLEKKIAQ 120
  121 FHGREDTILY ASCFDANAGI FEAILTPEDA VFSDELNHAS IIDGIRLCKA KKQRYRHRDL 180
  181 GDLEEQLKAS DARLKLIATD GVFSMDGNIA PLARIVELAR KYNALVFVDE CHATGFFWRH 240
  241 WTWHRGV

Type	Start	End	Confidence
Signal Peptide	1	24	0.65
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	247	0.99