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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19527977
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVISIRWKT CLPGLIIVSY LVCALLYFGM DITKIEPVEP RVVKNKTKVP RMYAKTINHD  60
   61 GNWETIVTNP ELKPRYRVGG GRTGVQFVIG VPTVLRPKKN YVLQTVDCLI RRMTPEQRDN 120
  121 CLIVIFVGET KLQFAKFIVR ELRVNHSTHM QAGLIDVIAP PLNYYPNFSR LHITLNDDPQ 180
  181 RVQWRTKQNL DYIYLMSYAK SRGLYYLQLE DDVMANVGFM DYIQKFAVLH GSFRIAHQID 240
  241 WIVMSFSELG FIGKLFRTSV LSSFVAYLKL FYNDQPIDWL LQSFVTLQSC RWDSVSDPEC 300
  301 QRDFESRLLR SSQSQFQHMG AQSSLADKQQ YQKDAFFNHN FARQRLRHLR QPLNLIATHR 360
  361 NSLLKHNLDL VEGETFIWIY MPRMPKMMKY LITNQFKQTQ LHIRNAKDTA HNLAEFNIEL 420
  421 VKGSPTLVAN SSSTRQCGFV MSHTVQSFAE RDGKAELPYN YMYYYIKEEP EGLSWFRRFR 480
  481 WASNASSFHE LRSTMVLLLL VFQFVNNL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle