YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47938856, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMVGLRASY HRILDRMEHM LPAKLRPFYN HPAGPKTVFF WAPMFKWGLV LAGLADMARP  60
   61 AEKLSTSQSA VLTATGLIWS RYSLVIIPKN WNLFAVNFFV GSAGGSQLYR IWMHNREQKA 120
  121 KEKEAQA

Type	Start	End	Confidence
Non-Cytoplasmic	1	36	0.53
Transmembrane Helix	37	55	0.61
Cytoplasmic	56	63	0.64
Transmembrane Helix	64	85	0.65
Non-Cytoplasmic	86	92	0.74
Transmembrane Helix	93	113	0.86
Cytoplasmic	114	127	0.89