YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8163674
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFASKKERKV HYSIRKFSIG VASVVVASLF MGSVVHATER GGSTPVATSS NKANKSQTEH  60
   61 MKAAEQVDEY VNKMIQLDKR KHTQNLALNI KLSAIKTKYL RELNVLEKKS KKEELTSKTK 120
  121 KEIDAAFEQF KKDTLKPGEK VEEAQKKVEE AEKKAKDQKE EDRRNYPTIT YKTLELEIAE 180
  181 SDVEVKKAEL ELVKVKAKGS RNEEKIKKAK AEVESKKAEA TKLEEIKTER KKAEEEAKRK 240
  241 AEAEEEVKDK LKKRTKRGAL GEPATPDKKE NDAKSSDSSV GEETLPSPSL KPEKKVAEAE 300
  301 KKVAEAEKKA KDQKEEDRRN YPTNTYKTLE LEIAESDVKV KEAELELVKE EAKEPQNEEK 360
  361 IKQAKAKVES KKAEATRLEK IKTDRKKAEE AKRKVAEEDK VKEKPAEQPQ PAPAEKPAPA 420
  421 PQPEKPAEQP KAEKPADQQA EEDYARRSEE EYNRLTQQQP PKTEKPAQPS TPKTGWKQEN 480
  481 GMWYFYNTDG SMATGWLQNN GSWYYLNSNG AMATGWLQNN GSWYYLNANG SMATGWLQNN 540
  541 GSWYYLNANG SMATGWLQYN GSWYYLNANG SMATGWLQNN GSWYYLNANG SMATGWLQYN 600
  601 GSWYYLNANG DMATGWLQYN GSWYYLNANG DMATGWLQNN GSWYYLNANG DMATGWLQYN 660
  661 GSWYYLNANG DMATGWLQYN GSWYYLNANG SMATDWVKDG DTWYYLEASG AMKASQWFKV 720
  721 SDKWYYVNGS GALAVNTTVD SYRVNANGEW VN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle