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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8163668
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFASKSERKV HYSIRKFSIG VASVVVASLV MGSVVHATEK EGATQVPTSS NRANESQAEQ  60
   61 GEQPKKLDSE RDKARKEVEE YVKKIVGESY AKSTKKRHTI TVALVNELNN IKNEYLNKIV 120
  121 ESTSESQLQI LMMESRSKVD EAVSKFEKDS SSSSSSDSST KPEASDTAKP NKPTEPGEKV 180
  181 AEAKKKVEEA EKKAKDQKEE DRRNYPTITY KTLELEIAES DVEVKKAELE LVKVKANEPR 240
  241 DEEKIKQAEA EVESKQAEAT RLKKIKTDRE KAEGEAKRRA DAKEQDESSK RRKSRVKRGD 300
  301 LGEQATPDKK ENDAKSSDSS VGEETLPSPS LKPEKKVAEA EKKVAEAKKK AEDQKEEDRR 360
  361 NYPTNTYKTL ELEIAESDVE VKEAELELVK EEAKEPRNEE KVKQAKAEVE SKKAEATRLE 420
  421 KIKTDRKKAE EEAKRKAAEE DKVKEKPAEQ PQPAPAPQPE KPAPKPENPA EQPKAEKPAD 480
  481 QQAEEDYARR SEEEYNRLTQ QQPPKTEKPA QPSTPKTGWK QENGMWYFYN TDGSMATGWL 540
  541 QNNGSWYYLN ANGDMATGWL QYNGSWYYLN ANGDMATGWL QNNGSWYYLN ANGDMATGWL 600
  601 QYNGSWYYLN SNGAMVTGWL QYNGSWYYLN SNGAMVTGWV KDGDTWYYLE ASGAMKASQW 660
  661 FKVSDKWYYV NGSGALAVNT TVDGYGVNAN GEWVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle