YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45433905
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWWMMGEGGG HYCSKKSDDI CGDVCDQESN RVLGMSRLRC IFRGYDVKTF LILFALVPTC  60
   61 ILIIYLHGQK ISYFLRPLWE SPPKEFNMIT HYYDGNVSMK NLCKLHGWKV REFPRRVYDA 120
  121 VLFSNEIEML TLRWKELYPY ITQFVLLEAN STFTGKPKPL YFCSYRDKFK FVESRFTYGT 180
  181 VGGRFKKGEN PFVEEAFQRV ALDQLLRIAG ITDDDLLIMS DVDEIPSRHT INLLRWCDDI 240
  241 PEVLHLQLKN YLYSFEFHVD DNSWRASVHR YKSGKTRYVH YRQSDDLLAD SGWHCSFCFR 300
  301 RISDFVFKMK AYSHNDRVRF SSYLNPKRIQ KIICKGSDLF DMLPEEYTFK EIIGKMGPVP 360
  361 HSFSAVHLPS YLLENAEDYK FLLPGNCIRE SG

Type	Start	End	Confidence
Cytoplasmic	1	46	0.96
Transmembrane Helix	47	68	0.92
Non-Cytoplasmic	69	392	0.99